Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12116g00001 AATGAGGGTCTCCGAGTTGCTTTTATTCATGTTGATGAAAGTACAACTGATGAAAGCACCCCACGGGTGTTTTACTCAAAGCTTGTCAAAGCCGATATAAACGGAAAAGATCAGGAAATATATTCTATCAAACTTCCTGGGGATCCAAAGCTTGGTGAAGGAAAGCCAGAGAACCAAAACCATGCGATAATATTCACACGTGGTGATGCGCTTCAAACTATTGATATGAATCAGTATTCTATAGTGTTCTAG 252 0.3968 NEGLRVAFIHVDESTTDESTPRVFYSKLVKADINGKDQEIYSIKLPGDPKLGEGKPENQNHAIIFTRGDALQTIDMNQYSIVF 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12116g00001 83 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 2 81 - -
Trme12116g00001 83 Pfam 1,3-beta-glucan synthase component 3 78 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12116g00001 Trme-Chr12116 274 739 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12116g00001 1 78 Cell Wall Biosynthesis AT3G07160 73.077 3.22e-36 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12116g00001 K11000 - lja:Lj0g3v0179159.1 155.992