Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme121165g00001 TTAGCATTGGATCCATTAATTGGAGCAATATCTGCTGGAAATGTTGTAGTCATAAAGCCATCAGACCAAGCTCCAGCATGCTCTTCTTTTCTTGCCAATACCCTTCCTCAATACTTGGACACTAATGCCATAAAGGTCATTGAAGGTGGTGGAGATGTCTGTGAACAAATACTGCTACATAAATGGGACAAAATATTCTTCACCGGTATTTTTTCCTTCGAATTTCCTGAAAAATTGAAATCTGTATTCAAATTTGAACCGTTCGGTCTCAATTCAACGACCATTAATGCACTGACTGCGTAA 303 0.3861 LALDPLIGAISAGNVVVIKPSDQAPACSSFLANTLPQYLDTNAIKVIEGGGDVCEQILLHKWDKIFFTGIFSFEFPEKLKSVFKFEPFGLNSTTINALTA 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme121165g00001 100 SUPERFAMILY ALDH-like 2 69 IPR016161 GO:0016491
Trme121165g00001 100 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 69 IPR016162 GO:0016491
Trme121165g00001 100 PANTHER ALDEHYDE DEHYDROGENASE 1 69 IPR012394 GO:0006081
Trme121165g00001 100 Pfam Aldehyde dehydrogenase family 5 69 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme121165g00001 Trme-Chr121165 317 619 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme121165g00001 1 69 Aldehyde Dehydrogenase Gene Family AT4G36250 66.667 8.92e-26 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme121165g00001 K00128 - gmx:100809812 127.102