Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme121142g00001 ACTATGTTCCCTGGCATTGCTGATAGAATGAGCAAGGAAATCTCTGCTTTGGCCCCAAGTAGCATGAAGATCAAGGTGGTCGCACCACCTGAGAGAAAATACAGTGTCTGGATTGGTGGTTCCATCTTGGCATCTCTTAGCACCTTCCAGCAGTTTGTGGTTAGCTTACTTGAGCTTATCTATTGA 186 0.457 TMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQFVVSLLELIY 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme121142g00001 61 SUPERFAMILY Actin-like ATPase domain 1 55 IPR043129 -
Trme121142g00001 61 Pfam Actin 1 55 IPR004000 -
Trme121142g00001 61 Gene3D - 36 55 - -
Trme121142g00001 61 PANTHER ACTIN 1 53 IPR004000 -
Trme121142g00001 61 Gene3D - 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme121142g00001 Trme-Chr121142 1 431 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme121142g00001 1 58 Cytoskeleton Gene Families AT5G09810 89.655 6.50e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme121142g00001 K10355 - jre:108986355 104.375