Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme121020g00001 GTTAACACTGTTAACCGCCTTCACCGTGTTCCCGGAAATCATCTCGGGAACCTATTGTCCATGATAAGGGACCAGGCACCGAACATAGTGACGCTTGTCGAGCAAGAAGCAAGCCATAATGGACCATACTTTTTGGGCCGATTTCTTGAGGCCTTGCATTACTACTCAGCGATTTTCGACTCCTTGGATGCAACTTTTCCTGTGGAGTCGGCACCTAGGGCAAAGGTGGAGCAATATATATTTGCCCCGGAGATTCGGAACATTGTGGCGTGTGAAGGGGAGGAGAGGATAGAGAGACATGAGAGGTTGGAGAAATGGAGGAAGATAATGGAAGGGAAAGGGTTCAAAGGAGTTCCTTTAAGTCCTAATGCGGTGACTCAATCAAGGATATTGTTGGGTTTGTATTCATGTGATGGTTATAGGTTAACTGAGGATAAGGGTTGCTTGTTGCTTGGGTGGCAAGACAGAGCCATCATCGCAGCTTCTGCATGGCGATGCTGA 501 0.477 VNTVNRLHRVPGNHLGNLLSMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPVESAPRAKVEQYIFAPEIRNIVACEGEERIERHERLEKWRKIMEGKGFKGVPLSPNAVTQSRILLGLYSCDGYRLTEDKGCLLLGWQDRAIIAASAWRC 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme121020g00001 166 ProSiteProfiles GRAS family profile. 1 165 IPR005202 -
Trme121020g00001 166 Pfam GRAS domain family 1 165 IPR005202 -
Trme121020g00001 166 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 160 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme121020g00001 Trme-Chr121020 1 501 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme121020g00001 1 166 GRAS Transcription Factor Family AT1G66350 50.000 2.46e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme121020g00001 GRAS 5.5e-59 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme121020g00001 - - ccaj:109815322 321.242