Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme120987g00001 ATGGCTGATAGGTACTCCCAGTTGAACGGTGCCTTCTATGGCCCCGCCATACCACCGACGACGGAGCAAAACCGCTCTAGCTACCATCGCAATAGAAGCTGTTGTGGTTGTCTCTTTAGCATCTTATGGAAGATTGTTGTCGCACTCGCGATTCTCTTTGGTCTCATAATAGTTATCTTTTATCTCATTGTTCAACCTCGCGCCTTCAAGTTCTATGTCACGAAAGCTCAACTAACCCAATTTGATTATACCAACAACACACTACACTACAATATGGTGCTCAATTTCACAGCCCGCAACCCAAACAAAAAACTCGGCATCTATTACGATGATGTGGAGGCTCGAGCATTCTATGAAGGGTCAAGGTTTGCTATTGTTGATGTGATCACATTCAAGAACTCGTTCCGCCAAGACAAGAAGANAAGTGATCCTATGAGTGGCGTTTTCTCAGGACAACAACTGTTGATGCTCGACAACGATCAAGTATCCGAGTTCAACAAAGACAAGAGTGTTGGAGTATATGATATTCGTGTGAAGCTCTACTTCAGAATTAG 554 0.4368 MADRYSQLNGAFYGPAIPPTTEQNRSSYHRNRSCCGCLFSILWKIVVALAILFGLIIVIFYLIVQPRAFKFYVTKAQLTQFDYTNNTLHYNMVLNFTARNPNKKLGIYYDDVEARAFYEGSRFAIVDVITFKNSFRQDKKXSDPMSGVFSGQQLLMLDNDQVSEFNKDKSVGVYDIRVKLYFRI 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme120987g00001 184 PANTHER OS05G0367900 PROTEIN 33 184 IPR044839 GO:0098542
Trme120987g00001 184 Pfam Late embryogenesis abundant protein 96 180 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme120987g00001 Trme-Chr120987 18 571 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme120987g00001 63 184 SNARE and Associated Proteins AT1G32270 34.884 3.25e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme120987g00001 - - gmx:100795302 266.929