Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme120818g00001 CGGAGGCCAAGAGGATGCGGTGGTCGCTTCTTGAACACAAAAATTTCTACTGATGGAAATGGGAAAACCGGGAATGAGATGAACAAAAAAACCGGCGGCGGCCTACAACTGCAGTCCAGTGCTTCACAGAGTTCTGAAGTCCTGCAATCTGAGGTTGGAACTTTGAATTCGTTGAAAGAGACAAATGGAGGCAGTCCAAATGTCTCGGGGTCGGAGGTGACTAGCATGTATTCACAGGGAGGTCTTGATAGCTTTGCTGTCAATCATATCGGATCTTNNNNNNNNNNANNNNNNNNNNANNNNNATACTGGACACGGTATCGTCATGCCAACAAAATGGTTTGCAACAGCTGTCACTGGCAGACAGCTGTTGCAACCATAA 381 0.4409 RRPRGCGGRFLNTKISTDGNGKTGNEMNKKTGGGLQLQSSASQSSEVLQSEVGTLNSLKETNGGSPNVSGSEVTSMYSQGGLDSFAVNHIGSXXXXXXXXXXTGHGIVMPTKWFATAVTGRQLLQP 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme120818g00001 126 ProSiteProfiles NF-YA/HAP2 family profile. 1 13 IPR001289 GO:0003700|GO:0006355
Trme120818g00001 126 MobiDBLite consensus disorder prediction 13 76 - -
Trme120818g00001 126 MobiDBLite consensus disorder prediction 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme120818g00001 Trme-Chr120818 2 382 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme120818g00001 1 118 CCAAT-HAP2 Transcription Factor Family AT3G05690 43.548 1.87e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme120818g00001 K08064 - gmx:100527677 147.517