Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme120740g00001 ATGCCTCCCAAGCTCGATCCATCACAGGTCGTTGAAGTCTACGTCCGAGTAACCGGAGGCGAAGTCGGCGCCGCCAGTTCCCTCGCTCCAAAGATCGGACCTCTCGGTCTCTCCCCAAAGAAGATCGGAGAAGACATTGCGAAAGAAACCGCCAAGGACTGGAAGGGTCT 170 0.5706 MPPKLDPSQVVEVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKDWKGL 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme120740g00001 57 PANTHER 60S RIBOSOMAL PROTEIN L12 1 57 IPR000911 GO:0003735|GO:0005840|GO:0006412
Trme120740g00001 57 Pfam Ribosomal protein L11, N-terminal domain 13 57 IPR020784 -
Trme120740g00001 57 SUPERFAMILY Ribosomal L11/L12e N-terminal domain 1 57 IPR036796 -
Trme120740g00001 57 Gene3D - 1 57 IPR036796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme120740g00001 Trme-Chr120740 455 624 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme120740g00001 1 57 Cytoplasmic Ribosomal Protein Gene Family AT2G37190 92.982 9.42e-34 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme120740g00001 K02870 - ppp:112282658 116.316