Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12062g00001 ATGTTTTACGATGAAATTTCAATTTTTGTTATTACACAGATTGTTGGAGGATTGGGTCTCTCATGGCAACTATCTTTTGGTATTCTGGTCCTCCTCTACTTCTACTCTCATTACTTCTTTGCAAGTGGAGCTGCTCATATTGGTGCCATGTTTACTGCATTTTTGTCTGTTGCTACTGCTCTGGGGACTCCACCATTCTTCGGAGCCATGGTGCTGTCCTTCCTCTCCAACCTTATGGGAGGCCTTACTCATTATGGGATTGGGTCAGCTCCAGTGTTTTTCGGTGCCAACTATGTCCCACTTGCCAAATGGTGGGGTTATGGCTTTGTCATTAGTATTGTGAACATTATAATCTGGCTTGGACTCGGGTCTATTTGGTGGAAAGCCATTGGCTTGTGGTAA 402 0.4403 MFYDEISIFVITQIVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPFFGAMVLSFLSNLMGGLTHYGIGSAPVFFGANYVPLAKWWGYGFVISIVNIIIWLGLGSIWWKAIGLW 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12062g00001 133 Pfam Sodium:sulfate symporter transmembrane region 19 133 IPR001898 GO:0016020|GO:0022857|GO:0055085
Trme12062g00001 133 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 10 133 IPR030676 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12062g00001 Trme-Chr12062 1028 1429 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12062g00001 10 132 Antiporters AT5G12860 84.553 2.05e-68 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12062g00001 - - aip:107629031 246.128