Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1206158g00001 ATGAGCCTAAGAGGCCATCAGACAAAGCCCATTCGATTGCCAATTCAGGATGTCTACAAGATAGGAGGAATTGGAACTGTGCCTGTGGGACGTGTTGAGACCGGTGTCTTGAAACCTGGAATGGCG 126 0.5 MSLRGHQTKPIRLPIQDVYKIGGIGTVPVGRVETGVLKPGMA 42
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1206158g00001 42 PANTHER ELONGATION FACTOR 1 ALPHA 7 42 - -
Trme1206158g00001 42 SUPERFAMILY Translation proteins 7 41 IPR009000 -
Trme1206158g00001 42 Gene3D Translation factors 7 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1206158g00001 Trme-Chr1206158 1 126 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1206158g00001 9 41 Eukaryotic Initiation Factors Gene Family AT5G60390 87.879 3.31e-15 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1206158g00001 K03231 - rtp:109933965 70.8626