Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1203664g00001 TCTCAGGTGGCTGCCATTGCCGCACACAATGGTGCAACGGTGGAGCTATCGGAATCTGCTAGAGCCGGTGTTAAGGCGAGCAGTGACTGGGTTATAGAGAGTATGAGCAAAGGTACTGATAGTTACGGTGTCACCACAGGATTCGGCGCTACTTCCCACCGCCGAACCAAACAAGGTGGTGCTTTGCAAAAAGAGCTCATAAGGTAA 207 0.5169 SQVAAIAAHNGATVELSESARAGVKASSDWVIESMSKGTDSYGVTTGFGATSHRRTKQGGALQKELIR 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1203664g00001 68 Pfam Aromatic amino acid lyase 2 68 IPR001106 -
Trme1203664g00001 68 MobiDBLite consensus disorder prediction 44 68 - -
Trme1203664g00001 68 SUPERFAMILY L-aspartase-like 2 68 IPR008948 GO:0003824
Trme1203664g00001 68 Gene3D - 1 68 IPR024083 -
Trme1203664g00001 68 PANTHER HISTIDINE AMMONIA-LYASE 2 68 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1203664g00001 Trme-Chr1203664 1 207 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1203664g00001 2 68 Monolignol Biosynthesis Gene Families AT3G10340 80.882 7.49e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1203664g00001 K10775 - sspl:121795447 120.553