Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12027g00001 ATGGAAACTAATTCAGGAAACAAGAGATGTGCAAGAAAGGTTCAATTGCTTGTAACTTCAGCTCTTCTTTTACTACAAAACTTTCTAATCATCCCTCAGATATTTGCTGATGAAATTAGCTCTGTGCATATTGTATACATGGGAGATAAGCTATATCATAATACAGAAACTACTAAAAAGTATCACCAAAATATGCTGACTTCACTCCTAGGAAGCAAAGAAGCTGCAAAGAATTCACTTCTTTATAGCTATAAGCATGGATTTTCAGGGTTTGCTGCTAGAATGTCAAAGTCTCAAGCTCAAGATATAGCAAAGTTTCCTGAGGTAGTTTCTGTCATTCCAAATGGCATTCACAAACTTCACACAACTAGAAGTTGGGACTTTATTGGGGTCCATCATCCTTCCTCAAAAACTGTTTTCACTGAAAGCAACTTAGGTGAAGGAACCATCATAGGTGTTATTGACACAG 469 0.3667 METNSGNKRCARKVQLLVTSALLLLQNFLIIPQIFADEISSVHIVYMGDKLYHNTETTKKYHQNMLTSLLGSKEAAKNSLLYSYKHGFSGFAARMSKSQAQDIAKFPEVVSVIPNGIHKLHTTRSWDFIGVHHPSSKTVFTESNLGEGTIIGVIDT 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12027g00001 156 SUPERFAMILY Subtilisin-like 36 156 IPR036852 GO:0004252|GO:0006508
Trme12027g00001 156 PANTHER PROTEINASE INHIBITOR, PROPEPTIDE 36 123 - -
Trme12027g00001 156 Pfam Peptidase inhibitor I9 42 121 IPR010259 -
Trme12027g00001 156 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 34 121 IPR037045 -
Trme12027g00001 156 FunFam Subtilisin-like protease SBT5.3 32 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12027g00001 Trme-Chr12027 341 1301 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12027g00001 40 156 Subtilisin-like Serine Gene Family AT1G32960 53.846 1.50e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12027g00001 - - lja:Lj4g3v2578300.1 237.654