Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme120201g00001 GCTTGGGTTGTTGCTAATTATGCACTGGGAACTCTTGGAGGTGATCCTTCGGAGACAACTGGGATTATCGAACTTGGTGGTGCTTCTGCTCAGGTAACCTTTGTATCAAGAGAAGCAATGCTGCCTTTGTTCTCACGCACTGTTAAATTYGGGAATGTCACTTACAACCTTTACAGCCACAGCTTGCTTCATTTTGGCCTGGGATGGTAA 210 0.4571 AWVVANYALGTLGGDPSETTGIIELGGASAQVTFVSREAMLPLFSRTVKFGNVTYNLYSHSLLHFGLGW 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme120201g00001 69 Pfam GDA1/CD39 (nucleoside phosphatase) family 1 67 IPR000407 GO:0016787
Trme120201g00001 69 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 1 67 IPR000407 GO:0016787
Trme120201g00001 69 Gene3D Exopolyphosphatase. Domain 2 1 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme120201g00001 Trme-Chr120201 1 560 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme120201g00001 2 67 Calmodulin-binding Proteins AT3G04080 38.158 3.26e-09 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme120201g00001 K01510 - gmx:100807287 125.176