Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme120200g00001 ATGGTTGATCAAGTTCAGCGCCCTAGACTCATCGAGAATGTTGCACGCCAAACCGGTCTTTCTATGTACCAAAGCAGGTCATTTGGGAATTACGCCAACCCTGCATTTCAGTATCCAATGATGCCGGCATGTAGATCAACAGCAACCGACTTTTCTACTATTGCAACAACAGCTTCCCCTATCTTTGTTGCAGCTCCTGCTGAGAAAGGAAACTTTGTTGTCGACTTTCTCATGGGAGGAGTTTCAGCTGCTGTGTCTAAAACCGCTGCTGCTCCTATTGAACGAATTAAGCTTTTGATCCAGAATCAAGATGAGATGATTAAAGCTGGTAGACTTTCTGAGCCCTATAAGGGAATTGGTGACTGTTTTAAGCGAACAATGGCTGATGAAGGTGTTGTT 399 0.4436 MVDQVQRPRLIENVARQTGLSMYQSRSFGNYANPAFQYPMMPACRSTATDFSTIATTASPIFVAAPAEKGNFVVDFLMGGVSAAVSKTAAAPIERIKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTMADEGVV 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme120200g00001 133 SUPERFAMILY Mitochondrial carrier 70 132 IPR023395 -
Trme120200g00001 133 PRINTS Mitochondrial carrier protein signature 75 88 IPR002067 GO:0055085
Trme120200g00001 133 PRINTS Mitochondrial carrier protein signature 88 102 IPR002067 GO:0055085
Trme120200g00001 133 ProSiteProfiles Solute carrier (Solcar) repeat profile. 70 133 IPR018108 -
Trme120200g00001 133 Gene3D Mitochondrial carrier domain 65 133 IPR023395 -
Trme120200g00001 133 Pfam Mitochondrial carrier protein 71 132 IPR018108 -
Trme120200g00001 133 PRINTS Adenine nucleotide translocator signature 116 133 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trme120200g00001 133 PRINTS Adenine nucleotide translocator signature 72 84 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trme120200g00001 133 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 63 133 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme120200g00001 Trme-Chr120200 1 399 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme120200g00001 1 131 Antiporters AT3G08580 61.486 3.80e-51 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme120200g00001 K05863 - psat:127085501 202.986