Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12018g00001 ATGAGTAGGGGTATCGCAGAACCAAAGCTCACTGCCATGGATGCCATGATCGACAAGTTGACTGGTGCTATATTTGTATTCCAAATTGTTGTTGTTATGGTTCTTGGCATAGCGGGTAATGTTTGGAAGGACACAGAAGCAAGGAAATTTTACGCCGACTCTTTACTCAATTGTATTCTAGATGAAGGTTCATGGAGGTGGACCCTCATGTTTGTTTCTTTGTTTTTGTTCCAGCAATGGTATGTTCTTTACCCTCTCGAAGGCCCTTGGCAACCGTTCCATCTCTGGCAGGTATCTCTGGATTTAGTGAAGAGCATTTATGCAAAGTTTATTGACTGGGACCATCAAATGATTGACCTAGAGACTAGCATTCCATCCCATGCAACAAATACAGCAATAAGCGAGGACCTTGGACAAGTTGAGTACATATTGACGGACAAAACAGGCACCCTGACTGAGAATAAGATGATATTTAGAAGATGTTGTATTAGTG 493 0.4199 MSRGIAEPKLTAMDAMIDKLTGAIFVFQIVVVMVLGIAGNVWKDTEARKFYADSLLNCILDEGSWRWTLMFVSLFLFQQWYVLYPLEGPWQPFHLWQVSLDLVKSIYAKFIDWDHQMIDLETSIPSHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCIS 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12018g00001 164 Gene3D - 154 163 IPR023299 GO:0000166
Trme12018g00001 164 ProSitePatterns E1-E2 ATPases phosphorylation site. 146 152 IPR018303 -
Trme12018g00001 164 Gene3D - 141 153 IPR023214 -
Trme12018g00001 164 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 4 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12018g00001 Trme-Chr12018 16 1322 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12018g00001 1 164 Primary Pumps ATPases AT5G44240 62.778 2.79e-62 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12018g00001 K01530 - gmx:100786505 222.246