Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme120168g00001 GTTTTCTACAAAACAAAAGCTGCTTTGAAACTGCCACCAAATGCTTCAATTCCAGCAGTGTTTGTGTTTGGAGATTCAATCATGGATACGGGAAATAATAACAACATGACAACACCATCTAGGTGCAATTTCCCTCCATATGGCAAAGATTTTCAAGGAGGAATTCCAACCGGAAGATTTAGCAACGGAAAGGTTCCATCAGATCTTATAGGTAATATTCTTTGCAACAAAATATGA 237 0.3755 VFYKTKAALKLPPNASIPAVFVFGDSIMDTGNNNNMTTPSRCNFPPYGKDFQGGIPTGRFSNGKVPSDLIGNILCNKI 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme120168g00001 78 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 20 31 IPR008265 GO:0006629|GO:0016298
Trme120168g00001 78 Gene3D SGNH hydrolase 6 77 IPR036514 -
Trme120168g00001 78 Pfam GDSL-like Lipase/Acylhydrolase 20 67 IPR001087 GO:0016788
Trme120168g00001 78 PANTHER GDSL ESTERASE/LIPASE EXL3 17 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme120168g00001 Trme-Chr120168 304 540 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme120168g00001 12 72 Pollen Coat Proteome AT1G75930 47.541 5.03e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme120168g00001 - - vvo:131609242 124.79