Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme120165g00001 GAGCAAGGAGTTGCACAAGCAATTATACGATCTGTTGTTGATTTCAAAAGGGATCCATGGCCAAAGGTTTCTGATAATGCAAAAGACCTTGTGAAGAAGATGCTCAATCCTGACCCAAAGCGGCGACTTACTGCACAAGAAGTGTTAGATCATCCATGGTTAATAAATGCAAAGAAAGCTCCCAATGTTTCATTAGGAGAAACAGTTAGAGCAAGGCTAAAACAGTTTTCTGTAATGAACAAGCTTAAGAAAAGAGCTTTGAGGGTTATTGCAGAGCATTTGTCGGTAGAAGAAGCTGCCGGATTAAAAGAGGGATTCAAGCTTATGGATACGAGCAACAAAGGCAAGATCAACATTGATGAACTACGAGTAGGGTTGCATAAACTAGGCCATCAA 396 0.4066 EQGVAQAIIRSVVDFKRDPWPKVSDNAKDLVKKMLNPDPKRRLTAQEVLDHPWLINAKKAPNVSLGETVRARLKQFSVMNKLKKRALRVIAEHLSVEEAAGLKEGFKLMDTSNKGKINIDELRVGLHKLGHQ 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme120165g00001 132 SUPERFAMILY Protein kinase-like (PK-like) 4 73 IPR011009 -
Trme120165g00001 132 FunFam Calcium-dependent protein kinase 7 1 61 - -
Trme120165g00001 132 Gene3D - 61 132 - -
Trme120165g00001 132 Gene3D Transferase(Phosphotransferase) domain 1 4 54 - -
Trme120165g00001 132 ProSiteProfiles Protein kinase domain profile. 1 54 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme120165g00001 132 ProSiteProfiles EF-hand calcium-binding domain profile. 97 132 IPR002048 GO:0005509
Trme120165g00001 132 Pfam Protein kinase domain 12 54 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme120165g00001 132 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 124 - -
Trme120165g00001 132 SUPERFAMILY EF-hand 83 131 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme120165g00001 Trme-Chr120165 1 626 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme120165g00001 1 131 EF-hand Containing Proteins AT3G57530 83.206 3.40e-77 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trme120165g00001 Pkinase 2.7e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme120165g00001 K13412 - gmx:100790745 252.292