Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme120129g00001 GTGGCAAAAGCCTTAGCAGCAGAAGGAAAATCTGGAGACTGGGAAATAGACAGGAGATCATTAAAGATAGGAGAAAAAATAGCATCTGGGTCCTGTGGAGATTTGTATCATGGAGTTTATCTTGGTGAAGATGTTGCTGTTAAGGTTCTGAAATCTGAGCAACTGAATGATGCCTTAGAAGATGAGTTTACTCAAGAAGTAGCAATTTTAAGGTCAGTATTCTGCTGA 228 0.3947 VAKALAAEGKSGDWEIDRRSLKIGEKIASGSCGDLYHGVYLGEDVAVKVLKSEQLNDALEDEFTQEVAILRSVFC 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme120129g00001 75 ProSiteProfiles Protein kinase domain profile. 21 75 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme120129g00001 75 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 11 72 - -
Trme120129g00001 75 Gene3D Phosphorylase Kinase; domain 1 11 74 - -
Trme120129g00001 75 SUPERFAMILY Protein kinase-like (PK-like) 13 72 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme120129g00001 Trme-Chr120129 86 432 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme120129g00001 14 73 MAP Kinase Kinase Kinase AT4G38470 60.000 6.91e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme120129g00001 - - gmx:100797987 126.716