Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme120062g00001 GTACTATTGCCATTGGTGAATGCTCCGATGATAAATTACACATTGACATGGCTAGAGTCAGCTGGTGTAGAAGAGGTTTTTGTTTTCTGTTGTGCTCATTCGAAGCAGGTGATTAACTATTTGGAGAAATCTGAGTGGTTTAATCAACCTAATTTCACTGTAACAACTATTGAGTCTCAGAATTCTGTCAGTGCTGGAGATGCTCTGCGTGTTATTTACGAGCGCAATGTGAATTGGTTCTTAGCTAATAAGCCTGAATATATAGTATGA 270 0.3852 VLLPLVNAPMINYTLTWLESAGVEEVFVFCCAHSKQVINYLEKSEWFNQPNFTVTTIESQNSVSAGDALRVIYERNVNWFLANKPEYIV 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme120062g00001 89 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 89 IPR029044 -
Trme120062g00001 89 SUPERFAMILY Nucleotide-diphospho-sugar transferases 2 74 IPR029044 -
Trme120062g00001 89 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme120062g00001 Trme-Chr120062 175 624 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme120062g00001 1 75 Eukaryotic Initiation Factors Gene Family AT2G34970 74.667 6.44e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme120062g00001 K03240 - psat:127132412 154.836