Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme12003g00001 AAGAAGAAATTGGGCACCGTGCATCTTCCTGAAAATATTATGCCATTTTTTGACAAATTAACATACCTTGAGTGGAATGGGTATCCCTTGAAGACTCTTCCACAACCTTTTCGTGCGGAGCAGCTGATTCAAATTTGTTTGCCACACAGAAACATTGAACATCTTTGGTACGGGATGCAGGAACTTGTGAATTTAGAGGCAATCGACCTAAGTGAGTGCAAACAGTTGACCATCCTCCCTGACTTGTCTGGGGCATTAAAACTCAAAGAGTTGCGCCTTTCCGGTTGTTTAAAATTATGTGAAGTTCAGGCGTCTGCTTTTTCTAAGGACACACTTGATACTTTGCTACTGGATGGGTGCACACAATTGCCAAGTCTTATGGTGTTGTAA 390 0.4205 KKKLGTVHLPENIMPFFDKLTYLEWNGYPLKTLPQPFRAEQLIQICLPHRNIEHLWYGMQELVNLEAIDLSECKQLTILPDLSGALKLKELRLSGCLKLCEVQASAFSKDTLDTLLLDGCTQLPSLMVL 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme12003g00001 129 Gene3D Ribonuclease Inhibitor 2 128 IPR032675 -
Trme12003g00001 129 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 126 IPR044974 GO:0006952
Trme12003g00001 129 SUPERFAMILY L domain-like 11 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme12003g00001 Trme-Chr12003 69 905 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme12003g00001 20 126 WRKY Transcription Factor Family AT5G45050 34.579 3.72e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme12003g00001 - - psat:127076353 211.075