Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme119846g00001 GGTGTGAACAAGGGGATTGTGGCTAAACGCCTGCTTTCAGCCATGCAAGGAAAGGAAATGTCACCTGATTTTGTTTTGTGTATAGGCGACGATCGATCTGACGAAGATATGTTTGAGGTAATCACTAGTTCTGGCCCTTCCATGGCACCCAGGGCTGAAGTATTTGCATGCACCGTTGGTCGAAAACCCAGTAAGGCCAAGTATTATCTGGATGATACTACTGATATAGTGAGAATGGTGCAGGGTTTAGCCTGTGTTTCAGACCAAATAGTTTTATGTTAG 282 0.4468 GVNKGIVAKRLLSAMQGKEMSPDFVLCIGDDRSDEDMFEVITSSGPSMAPRAEVFACTVGRKPSKAKYYLDDTTDIVRMVQGLACVSDQIVLC 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme119846g00001 93 Pfam Trehalose-phosphatase 1 73 IPR003337 GO:0003824|GO:0005992
Trme119846g00001 93 SUPERFAMILY HAD-like 1 84 IPR036412 -
Trme119846g00001 93 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 84 IPR001830 GO:0003824|GO:0005992
Trme119846g00001 93 Gene3D - 1 91 IPR023214 -
Trme119846g00001 93 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme119846g00001 Trme-Chr119846 229 510 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme119846g00001 1 90 Trehalose Biosynthesis Gene Families AT1G68020 73.913 3.04e-43 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme119846g00001 K16055 - cit:102609352 157.147