Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme119702g00001 CGTAGTTTAGCTCTCATATCGTACATTCAGAAACTATTACGTCAAGAAATTCAGATTCCTCAACCAGAAGAAGAAAGCCAGAAACTATTAAGTCGTGCAATTCAGATCTTTCAGCCCGCTGAAGGAAGCGGAAAAAGAGAAGAGGGTGACGTTGCGCTGAGCAACAACAAAAGAGATTTCAATGGCGATCCGAGTAACAATAGATGGCCAGTTGTGGTGAACAACAACAAAAGAGATTTCAACGGCGAACCGTGTAACAATAGATGGCCAGATGTGGAAGTACAAGCGCTCATAGCAGTAAGAACTGCATTGGAACACAAGTTCGGTCATATGGGATCGAAAGGATCATCAATATGGGAGGAGATATCTGATGCAATGCGAGACAGGGGATACAATCGTTCTGCGAAGAAGTGTAAGGAGAAATGGGAAAACATCAACAAGTACTATAAGAGGACAGTGGGAAGCGGCAAGAAACGGCCTCTAAATAGTAAAACTTGTTCTTACTTCGATGAATTGGACAATCTGTATAGAAATGGATCCTCCAACAGCCTTGGAAATGCATTAACCATTACCAACAATGTTTCCATTAGTGAAGAAAAGGAGCAGGGTGAAATTTGA 618 0.4191 RSLALISYIQKLLRQEIQIPQPEEESQKLLSRAIQIFQPAEGSGKREEGDVALSNNKRDFNGDPSNNRWPVVVNNNKRDFNGEPCNNRWPDVEVQALIAVRTALEHKFGHMGSKGSSIWEEISDAMRDRGYNRSAKKCKEKWENINKYYKRTVGSGKKRPLNSKTCSYFDELDNLYRNGSSNSLGNALTITNNVSISEEKEQGEI 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme119702g00001 205 FunFam Trihelix transcription factor GT-2 89 151 - -
Trme119702g00001 205 Pfam Myb/SANT-like DNA-binding domain 87 175 IPR044822 -
Trme119702g00001 205 PANTHER FI21293P1 1 190 - -
Trme119702g00001 205 Gene3D - 89 151 - -
Trme119702g00001 205 CDD GT1 87 152 - -
Trme119702g00001 205 ProSiteProfiles Myb-like domain profile. 87 146 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme119702g00001 Trme-Chr119702 1 618 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme119702g00001 84 176 Trihelix Transcription Factor Family AT1G76890 60.215 1.31e-32 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Trme119702g00001 Myb_DNA-bind_4 9.1e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme119702g00001 - - tpra:123899422 394.43