Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1196920g00001 CAGGAAACTGAGGAGTTGATTGCAGATGTTCTTGGAGTTGAAGTTTTCAGACAGGCAGTTGCTGGTAATATTCTTTCGGGCAGTTACTGTGCTCTGTCCAATAGAGGTGGTTTGGTAAGAGCAAGACATGTCCTTTTGAATGCTTCAAAAATTTGA 156 0.4167 QETEELIADVLGVEVFRQAVAGNILSGSYCALSNRGGLVRARHVLLNASKI 51
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1196920g00001 51 SUPERFAMILY Pentein 2 41 - -
Trme1196920g00001 51 Gene3D - 1 48 - -
Trme1196920g00001 51 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 1 42 IPR002769 GO:0042256|GO:0043022
Trme1196920g00001 51 Pfam eIF-6 family 1 42 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1196920g00001 Trme-Chr1196920 1 156 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1196920g00001 1 42 Eukaryotic Initiation Factors Gene Family AT3G55620 76.190 4.72e-18 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1196920g00001 K03264 - pop:18101353 73.1738