Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme119675g00001 GAAGAAGATAATGGCCTTCTCATGAACTACTACAAAGAATCATGCCCTCAAGCTGAAGAAATCATCAAAGAACAAGTCAAACTTCTCTACAAACGCCACAAAAACACTGCTTTCTCATGGCTCAGAAACATTTTCCATGACTGTGCTGTTCAGAGTTGTGATGCTTCTTTGTTGCTGACATCAACAAGAAGAAGCTTGTCTGAGCAAGAACATGACAGAAGCTTTGGTTTGAGGAATTTTAGGTACATTGATACCATCAAAGAAGCTCTTGAAAGAGAGTGTCCTGGAGTTGTTTCTTGTTCTGATATCCTTGTTCTTTCTGCTAGAGATGGCATTGTTTCGGTATAA 348 0.3937 EEDNGLLMNYYKESCPQAEEIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLTSTRRSLSEQEHDRSFGLRNFRYIDTIKEALERECPGVVSCSDILVLSARDGIVSV 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme119675g00001 115 PRINTS Plant peroxidase signature 15 34 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme119675g00001 115 PRINTS Plant peroxidase signature 39 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme119675g00001 115 PRINTS Plant peroxidase signature 78 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme119675g00001 115 PRINTS Plant peroxidase signature 97 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme119675g00001 115 Pfam Peroxidase 23 113 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme119675g00001 115 PANTHER PEROXIDASE 25-RELATED 8 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme119675g00001 115 FunFam Peroxidase 9 115 - -
Trme119675g00001 115 SUPERFAMILY Heme-dependent peroxidases 6 113 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme119675g00001 115 ProSiteProfiles Plant heme peroxidase family profile. 5 115 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme119675g00001 115 Gene3D - 6 115 - -
Trme119675g00001 115 PRINTS Haem peroxidase superfamily signature 98 115 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme119675g00001 115 PRINTS Haem peroxidase superfamily signature 37 51 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme119675g00001 Trme-Chr119675 1 448 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme119675g00001 1 115 Peroxidase AT4G21960 82.609 5.99e-69 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme119675g00001 K00430 - gmx:547513 213.386