Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme119530g00001 ATGGGAATGGCAGTAATGTTGGATGAAATCATAAACTATGTTCAGTCTTTGCAGCATCAAGTAGAGTTTCTTTCTTTGAAGCTTACTGCAGCAAGCACTTATTATGACTTCAATTCAGAGACAGATGATTTAGAAACAATGCAG 144 0.3611 MGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTYYDFNSETDDLETMQ 48
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme119530g00001 48 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 41 IPR024097 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme119530g00001 Trme-Chr119530 37 295 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme119530g00001 1 48 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 85.417 1.85e-24 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme119530g00001 - - gmx:100806942 92.4337