LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trme119523g00001	TCAAAGGGATGTTCAGCCAAAAAGCAAGTAGAGAGAAGTAGCACAGATGCTTCAATGCTCATCATCACCTATACTTCAAAACACAACCATCCAGATCCTACTGCCGTCTCTGCCACAAACTCAGCTCAACAGCCAAAAGAATCTGAAACCGAAACAATCAAAGATCTCCCAATAACCTCCAAGGAAGAAGACCAAGAGCATATCGTCGAGGAAATGATTAATAATAAGAGCATTGTGACTAGTACTGATCAAGTTACAAATGAAGAAAATTTTCATTACTTGCAATCTCCAATACACTGCTCTGAGGAGATTATTATAGACCAAGAAGATCCTTTCAAATTGAACATAGAAAAAAACCANATTGACAAAATAGATATTCTCTTAGAGGAAGAGCCACTTTGCTATGCACAGTTAAAGAATTTGACAGAATCTAAATCAGAAGAACTTGATTTTTTCGATGAGCTTGAGGAGTTACCTATGTCTTCATCTATTTTACATTTTACTAGGAGCATTTTTTCTGATGAAAGGATTCCTGTTGCTCCTTCTTGA	549	0.3661	SKGCSAKKQVERSSTDASMLIITYTSKHNHPDPTAVSATNSAQQPKESETETIKDLPITSKEEDQEHIVEEMINNKSIVTSTDQVTNEENFHYLQSPIHCSEEIIIDQEDPFKLNIEKNXIDKIDILLEEEPLCYAQLKNLTESKSEELDFFDELEELPMSSSILHFTRSIFSDERIPVAPS	182

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trme119523g00001	182	MobiDBLite	consensus disorder prediction	1	52	-	-
	Trme119523g00001	182	SUPERFAMILY	WRKY DNA-binding domain	2	33	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Trme119523g00001	182	Gene3D	WRKY domain	1	34	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Trme119523g00001	182	Pfam	WRKY DNA -binding domain	2	31	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Trme119523g00001	182	ProSiteProfiles	WRKY domain profile.	1	33	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Trme119523g00001	182	SMART	WRKY_cls	1	32	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Trme119523g00001	182	PANTHER	WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED	1	162	IPR044810	GO:0003700
	Trme119523g00001	182	MobiDBLite	consensus disorder prediction	10	47	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trme119523g00001	1	38	WRKY Transcription Factor Family	AT2G34830	73.684	1.43e-12	63.2

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Trme119523g00001		WRKY	6.5e-07	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trme119523g00001	-		-	gmx:100127368	243.817