Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme119348g00001 CCACCAGAAACCAAACTGTCCATGGCTGGAATCCTTGGTGAGCTGGTTTTGGACAATGATGTTAAAGTCCTTGTTGCTAGAACTGTGGGCTCATCTCTGATCAATATCATGAAAAGTGGTAATATGCAGTCAAGAGAAGCTGCACTGAAGGCACTAAATCAGATATCATCATGTGAGCCAAGCGCAAAGGTTTTAATAGAAGCTGGAATACTTTCCCCTCTTGTCAATGACCTTTTTGCAGTGGGCCCTAATCTGCTTCCCACTAGACTAAAAGAGGTCTCTGCTACAATTCTTGCCAGTATTATGAATTCAGGAGAAGACTTTGATTCGATTCCACTCGGATCTGATCACCAAACTCTGGTCTCAGAGGATATAGTTCATAAGCTACTACATCTTATTAGCAACACTGGTCCAGCAATTGAGTGCAACCTTCTCCAAGTTCTTGTTGGACTTGCTAGTTCTCCAACTACAGTGCTGAGTCTTGTTTCTGCT 492 0.4289 PPETKLSMAGILGELVLDNDVKVLVARTVGSSLINIMKSGNMQSREAALKALNQISSCEPSAKVLIEAGILSPLVNDLFAVGPNLLPTRLKEVSATILASIMNSGEDFDSIPLGSDHQTLVSEDIVHKLLHLISNTGPAIECNLLQVLVGLASSPTTVLSLVSA 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme119348g00001 164 Gene3D - 1 162 IPR011989 -
Trme119348g00001 164 SUPERFAMILY ARM repeat 2 154 IPR016024 -
Trme119348g00001 164 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 1 164 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme119348g00001 2 164 U-box Gene Family AT1G20780 69.325 3.79e-64 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme119348g00001 - - adu:107460240 276.559