Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme119077g00001 GATCACAAAGCCGATGTCTTTAGCTTTGCAATTGTTCTCTGGGAGCTGCTTACAGGAAAGCTTCCTTATGAGCATTTGTCCCCATTGCAAGCAGCAGTTGGAGTGGTTCACAAGGTATTCGTTCACTAG 129 0.4574 DHKADVFSFAIVLWELLTGKLPYEHLSPLQAAVGVVHKVFVH 42
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme119077g00001 42 Pfam Protein tyrosine and serine/threonine kinase 2 31 IPR001245 GO:0004672|GO:0006468
Trme119077g00001 42 SUPERFAMILY Protein kinase-like (PK-like) 1 37 IPR011009 -
Trme119077g00001 42 Gene3D Transferase(Phosphotransferase) domain 1 1 40 - -
Trme119077g00001 42 ProSiteProfiles Protein kinase domain profile. 1 42 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme119077g00001 Trme-Chr119077 1 256 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme119077g00001 1 40 MAP Kinase Kinase Kinase AT4G38470 82.500 2.24e-18 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Trme119077g00001 PK_Tyr_Ser-Thr 3e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme119077g00001 - - vum:124824038 77.7962