Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1189707g00001 ATGGGCGGAGATGATAATGAAGAGAAGAAGGTAGTGAAAGAGGAAGACTTGCATAAGTTTCCGTATCTCAAGTGTGTGATTTTGGAAAGATTGAGGCGTCATCCACCGGCTCATTTAGTGTTGCCACATGCGGTGACTGAGGATGTTGTTTTGAATGGTTATTTGGTGCCTAAAAATGGGA 181 0.4309 MGGDDNEEKKVVKEEDLHKFPYLKCVILERLRRHPPAHLVLPHAVTEDVVLNGYLVPKNG 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1189707g00001 60 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 59 - -
Trme1189707g00001 60 Gene3D Cytochrome P450 2 60 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme1189707g00001 60 SUPERFAMILY Cytochrome P450 9 59 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme1189707g00001 60 Pfam Cytochrome P450 8 59 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1189707g00001 Trme-Chr1189707 1 181 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1189707g00001 7 60 Cytochrome P450 AT1G64940 66.667 1.30e-19 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1189707g00001 K24184 - qsu:111996820 94.3597