Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme118881g00001 ATGAAAGCGGAAGCTGCAAAGGCCGATGTCCTCTATTTAATCTCCGGTGTGTGGAAACCGTCCGCAGAGCGCCTTTTCCTATGGATTGGAGGAGCCCGCCCCTCGCAGCTTCTAAATCTCATTGTGCCGCAACTTGACCCTTTGACCGAACAACAACTTGCCAGCATTAAAAAACTTCACCTATCGTCTCAGCAAGCCGAAGACGCTCTTTCACAAGGACTAGATAAACTTCAGCAGAGTCTGGTTCAAGACATGGCAGTTGATCCTCTCAGTGCAACAAATCATGGATTTCAGATGGCTATTGCTATAGGAAAATTCGAGGCACTAGAAGGTTTTGTAAGTCAGGTAATTTAA 354 0.4633 MKAEAAKADVLYLISGVWKPSAERLFLWIGGARPSQLLNLIVPQLDPLTEQQLASIKKLHLSSQQAEDALSQGLDKLQQSLVQDMAVDPLSATNHGFQMAIAIGKFEALEGFVSQVI 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme118881g00001 117 PANTHER TRANSCRIPTION FACTOR TGA9 1 115 - -
Trme118881g00001 117 Pfam Seed dormancy control 1 42 IPR025422 GO:0006351|GO:0043565
Trme118881g00001 117 ProSiteProfiles DOG1 domain profile. 1 117 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme118881g00001 Trme-Chr118881 5 463 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme118881g00001 1 115 Calmodulin-binding Proteins AT1G77920 58.621 3.00e-43 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme118881g00001 K14431 - gmx:100794268 180.259