Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme1188269g00001 | GGTGAAAAAGGAGTTAAAATTGGAGACTTTGGTTGTGCTAAGATGGTCGATGAAATTGCGCCGATCGCCGGAACTCCATTGTATATGGCGCCGGAGGTGGCGCGCGGTGAAGAACAAGGGTACCCTAGTGATGTTTGGTCACTTGGATGTACAATTGTTGAAATGGCAACTGGGTTTTCACCTTGGACCAATGTGGATGATCCTGTTCATGTT | 213 | 0.4742 | GEKGVKIGDFGCAKMVDEIAPIAGTPLYMAPEVARGEEQGYPSDVWSLGCTIVEMATGFSPWTNVDDPVHV | 71 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme1188269g00001 | 71 | PANTHER | CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED | 5 | 67 | - | - | |
Trme1188269g00001 | 71 | ProSiteProfiles | Protein kinase domain profile. | 1 | 71 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trme1188269g00001 | 71 | SUPERFAMILY | Protein kinase-like (PK-like) | 5 | 66 | IPR011009 | - | |
Trme1188269g00001 | 71 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 70 | - | - | |
Trme1188269g00001 | 71 | Pfam | Protein kinase domain | 4 | 65 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trme1188269g00001 | Trme-Chr1188269 | 1 | 213 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme1188269g00001 | 2 | 69 | MAP Kinase Kinase Kinase | AT4G26890 | 62.319 | 8.20e-25 | 93.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | STE_STE11 | Trme1188269g00001 | Pkinase | 2.4e-16 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trme1188269g00001 | K20716 | - | han:110929456 | 118.627 |