Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1187728g00001 ATGTCGGATCAGGTGATGGAATATTCCGGTGGAGGAGGGAGCGGCGGAGACGGAAGGAGGAAGAGGTACCGAACGAAATTCACGGCAGATCAGAAGGAAAAGATGTTGGGATTTGCTGAGAAGTTAGGATGGAAATTGCAGAGAAAAGAA 150 0.4867 MSDQVMEYSGGGGSGGDGRRKRYRTKFTADQKEKMLGFAEKLGWKLQRKE 50
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1187728g00001 50 Gene3D - 5 50 - -
Trme1187728g00001 50 SUPERFAMILY Homeodomain-like 6 48 IPR009057 -
Trme1187728g00001 50 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1187728g00001 Trme-Chr1187728 1 150 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1187728g00001 19 50 ZF-HD Transcription Factor Family AT1G14440 71.875 7.73e-13 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1187728g00001 - - vvo:131598807 88.5817