Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme118540g00001 ATGATTGGAATGGAAGCTGCTGGAATTCACGAGACAACCTACAACTCTATAATGAAGTGTGACGTGGATATCAGAAAGGATCTGTACGGAAACATTGTTCTCAGTGGTGGTTCAACTATGTTTCCTGGTATTGCTGACCATGTGGATATCCAAGGGTGA 159 0.4277 MIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADHVDIQG 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme118540g00001 52 PANTHER ACTIN 1 47 IPR004000 -
Trme118540g00001 52 Gene3D - 1 51 - -
Trme118540g00001 52 Pfam Actin 5 48 IPR004000 -
Trme118540g00001 52 SUPERFAMILY Actin-like ATPase domain 1 47 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme118540g00001 Trme-Chr118540 196 563 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme118540g00001 1 48 Cytoskeleton Gene Families AT3G12110 89.583 2.14e-26 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme118540g00001 K10355 - egr:104420889 97.8265