Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme118512g00001 GGTCACATAAACCCAGCAGTGACATTTGGGCTATTTTTGGCAAGAAAATTGTCCTTGACAAGGGCACTATTCTACATGGTGATGCAAGTGTTGGGTGCTATTTGTGGTGCTGGTGTAGTGAAAGGTTTTGAAGGTAAAAAAAGATATGGAGATTTGAACGGTGGTGCCAACTTTGTTGCTCCTGGTTACACTAAAGGTGATGGTCTTGGTGCTGAAATTGTTGGCACTTTCATTCTTGTTTACACCGTTTTCTCAGCCACTGATGCTAAACGTAGCGCCAGAGATTC 287 0.4321 GHINPAVTFGLFLARKLSLTRALFYMVMQVLGAICGAGVVKGFEGKKRYGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDS 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme118512g00001 96 Pfam Major intrinsic protein 1 95 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme118512g00001 96 SUPERFAMILY Aquaporin-like 1 93 IPR023271 -
Trme118512g00001 96 ProSitePatterns MIP family signature. 2 10 IPR022357 -
Trme118512g00001 96 Gene3D Glycerol uptake facilitator protein. 1 96 IPR023271 -
Trme118512g00001 96 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme118512g00001 96 PRINTS Major intrinsic protein family signature 71 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme118512g00001 96 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 96 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme118512g00001 Trme-Chr118512 345 631 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme118512g00001 1 96 Major Intrinsic Protein MIP AT4G00430 83.333 6.64e-51 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme118512g00001 K09872 - gmx:100780145 180.644