Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme118411g00001 ATGCTAAGAGAAAGCATTCACACTGATATCACCATCAATACCTCTGATGGAAGTATAGGAGTTCATAGAGCTGTTCTTTCGTCCCGGTCACCTGTCTTCCGGAGCATGTTTTCGCACGATCTTAAGGAGAAAGAGTTGTCAACCATAAACATCACAGACATGACAATTGAAACATGCCAAGCTTTTTTCAATTATCTTTACGGGATCATCAAAAACGAAGAATTTCTGACACATAGGCTGGCCCTTCTGCATGCAGCCGACAAGTACGACATATCTGACTTGAGAGAAGCCATCCATGAGAGTCTGCTAGAAGATATTGATACTAAAAAT 330 0.4121 MLRESIHTDITINTSDGSIGVHRAVLSSRSPVFRSMFSHDLKEKELSTINITDMTIETCQAFFNYLYGIIKNEEFLTHRLALLHAADKYDISDLREAIHESLLEDIDTKN 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme118411g00001 110 CDD BTB_POZ_ZBTB_KLHL-like 7 89 - -
Trme118411g00001 110 ProSiteProfiles BTB domain profile. 8 67 IPR000210 GO:0005515
Trme118411g00001 110 Gene3D Potassium Channel Kv1.1; Chain A 1 110 IPR011333 -
Trme118411g00001 110 SMART BTB_4 8 106 IPR000210 GO:0005515
Trme118411g00001 110 PANTHER OS08G0495500 PROTEIN-RELATED 1 110 IPR044714 -
Trme118411g00001 110 SUPERFAMILY POZ domain 2 104 IPR011333 -
Trme118411g00001 110 Pfam BTB/POZ domain 4 104 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme118411g00001 Trme-Chr118411 15 344 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Trme118411g00001 BTB 2.6e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme118411g00001 K10523 - gmx:100790186 191.045