Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme11840g00001 ATGGAACGTCGCGTTGGGAACAAGTTTCGTGTTGGTCGTAAGATCGGTAGTGGTTCCTTTGGAGAGATCTATTTAGGTACTAACATTCAAACTAATGAAGATGTTGCAATTAAGCTTGTAACTATGAATGATGAGAAACAACCCCTGGGGGTTGGCCTGATGGTGGGCTTGGGACCTCGGAGTGTGCTTCTCTTGATGGTCTCAAGTTCAAATTCTCTCGGTGCCAATTCTTGTGGCCCTAGTTCATACAGGGTATCGATCTGA 264 0.4545 MERRVGNKFRVGRKIGSGSFGEIYLGTNIQTNEDVAIKLVTMNDEKQPLGVGLMVGLGPRSVLLLMVSSSNSLGANSCGPSSYRVSI 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme11840g00001 87 Gene3D Phosphorylase Kinase; domain 1 1 53 - -
Trme11840g00001 87 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Trme11840g00001 87 SUPERFAMILY Protein kinase-like (PK-like) 4 45 IPR011009 -
Trme11840g00001 87 ProSiteProfiles Protein kinase domain profile. 9 87 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme11840g00001 7 54 CBL-interacting serine-threonine protein kinases AT5G58380 41.667 2.50e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme11840g00001 K02218 - egr:104449993 76.6405