Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme118257g00001 ATGAATGTCGGCACTAATCGAGGTGATGCTAAAGCATTCAAACTAGACACACTCCTAAAACTCGTAGATATAAAGGGAACAGATGGAAAGACCACATTGCTCCACTTTGTCGTCCAAGAGATCATTAGGTCTGAAGGAGCAGAAACTGAATCTGCAAACGGAAATATTCCCGAACAAATGGAGTCCAAATTTAACGAGGAGCAATTTAAGAAGAAAGGATTGCATGTTGTGGGTGGTCTCAGTAAAGACCTTGATAATGTCAAAAAAGCAGCAGGAATGGACTCGGATGTCTTAAGCAGCTATGTTACAAAGCTTGAAACGGGGCTTGAAAAAGTGCGGTTGGTTTTGCAATACGAGAAGCCAGATATGAAAGGCAATTTCTTCAAATCCACAAAGCTCTTTATGAAATACGCAGAAGACGAAATTGTGAGGATTAAGTCTCATGAAAGAGAGGCTTTATTCCTTGTGAAAGAAGTTACTGAATACTTTCATGGAAATGCAGCAAAGGAAGAAGCACACCCTTTAAGAATTTTCATGATT 540 0.3963 MNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGAETESANGNIPEQMESKFNEEQFKKKGLHVVGGLSKDLDNVKKAAGMDSDVLSSYVTKLETGLEKVRLVLQYEKPDMKGNFFKSTKLFMKYAEDEIVRIKSHEREALFLVKEVTEYFHGNAAKEEAHPLRIFMI 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme118257g00001 180 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 180 IPR015425 -
Trme118257g00001 180 Gene3D Formin, FH2 domain 1 180 IPR042201 -
Trme118257g00001 180 PANTHER FORMIN-RELATED 1 180 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trme118257g00001 180 Pfam Formin Homology 2 Domain 1 180 IPR015425 -
Trme118257g00001 180 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme118257g00001 Trme-Chr118257 45 584 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme118257g00001 1 180 FH2 protein (formin) Gene Family AT5G67470 67.222 7.27e-72 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme118257g00001 - - gmx:100806929 303.138