Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme118159g00001 ATCTTCAATGCTGAATTGGTTCTTGGAAATGTGACTAGGCACAGTGACGATGAAGTGCTGCCACAGCTTCTCATTTCTTGCATTCTTGATGAACTAGACAACATTGAAACCGATGCTATGCTGAGAAATTTCAACCAAAGCGAAATAAAGGGATTTCTATTTGATTGTGTAATCGAGTATCTAGAATCAAATTGCTTCCAACATTATTATAGCGTGTTTAAGTCATGGTGTGCATGGACAAAGGTTCCTTTATGCATAAAAGGCGAGATTTTGGTTCAAGAGGTGAAGAGTGAGATTATGAAGTGGGAATTTTTAGCAGGAATGGAACCAGATCAAATAATAGAATGGGAGATGAGTCACTCATTGGGGAAATGGACAGATTTCAACATTGAAGCTTTTGAGTTTGGTGTTGATATTGGTGAGGATGTGCTTCAAATTTTGCTAGATGAAATTGTTGAAGACCTTTGTAAATTTCAGGAAAGTTACTGTTTGAAGTTGATAAGATCATGCTATTAA 516 0.3663 IFNAELVLGNVTRHSDDEVLPQLLISCILDELDNIETDAMLRNFNQSEIKGFLFDCVIEYLESNCFQHYYSVFKSWCAWTKVPLCIKGEILVQEVKSEIMKWEFLAGMEPDQIIEWEMSHSLGKWTDFNIEAFEFGVDIGEDVLQILLDEIVEDLCKFQESYCLKLIRSCY 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme118159g00001 171 Pfam Domain of unknown function (DUF4378) 51 150 IPR025486 -
Trme118159g00001 171 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 154 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme118159g00001 91 155 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 35.385 2.97e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme118159g00001 - - tpra:123910908 299.286