Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme118141g00001 ATTGAGAAATGCACCGGAGTGTTCAACGGTTTGGAGTCATTGGTTGATGTTGGAGGAGGCACGGGGACCATGGCAAAGGCGCTTGCTAAATCATTCCCAAAAATGGAGTGCACTGTATTTGATCTCCCACATGTTGTCGATGGCTTGCAAGGAAGTGATAACTTAAACTACATTGGTGGAGACATGTTTAAGAAAATTCCTCCAGTTGATGCAATTTTGTTGAAGTGGATATTACATGATTGGAATGACGAAGAATGTGTAAAGATATTAAAAAATTGTAAGGATGCAATCGCGAACAAAGGTAAAAAAGCGAAGGTGATTATCATAGATATGGTGGTCGACAAAGAGAAGGGAAATGGTGAATCGGTTGAAACACAACTCTTCTTTGATATGCTAATGATGGTGTTGGCCTCCGGAAAAGAAAGAACCAAGAAAGAATGGATTAAGTTGATTTCTTCAGCTGGTTTTAGTGACTATAAGATAACTCCAATTTTAGGACTAAGATC 506 0.3913 IEKCTGVFNGLESLVDVGGGTGTMAKALAKSFPKMECTVFDLPHVVDGLQGSDNLNYIGGDMFKKIPPVDAILLKWILHDWNDEECVKILKNCKDAIANKGKKAKVIIIDMVVDKEKGNGESVETQLFFDMLMMVLASGKERTKKEWIKLISSAGFSDYKITPILGLRS 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme118141g00001 169 PANTHER O-METHYLTRANSFERASE 3 160 IPR016461 GO:0008168
Trme118141g00001 169 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 8 166 IPR029063 -
Trme118141g00001 169 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 169 IPR016461 GO:0008168
Trme118141g00001 169 CDD AdoMet_MTases 14 102 - -
Trme118141g00001 169 Gene3D Vaccinia Virus protein VP39 1 169 IPR029063 -
Trme118141g00001 169 FunFam O-methyltransferase ZRP4 1 169 - -
Trme118141g00001 169 Pfam O-methyltransferase domain 8 157 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme118141g00001 Trme-Chr118141 1 631 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme118141g00001 8 161 Monolignol Biosynthesis Gene Families AT1G51990 44.872 1.19e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme118141g00001 - K16040 gmx:100807238 281.952