Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1181276g00001 AGGAACCGTGGGGTTCTTGTTGGCGAAACTTGGGAGGATAGGATGGAATGCAGGCAATGGGGAACTCATTTTCCCCATGTTGCTGGCATTGCCGGTCAGAGTACTCACGGCGCTCAATCTGTAGCTCTTTCTGGGGGCTATGTTGATGACGAGGATCACGGTGAGTGGTTCTTGTACACTGGAAGTGGTGGAAGGGATTTGAGTGGGAACAAA 213 0.5164 RNRGVLVGETWEDRMECRQWGTHFPHVAGIAGQSTHGAQSVALSGGYVDDEDHGEWFLYTGSGGRDLSGNK 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1181276g00001 71 ProSiteProfiles YDG domain profile. 1 71 IPR003105 -
Trme1181276g00001 71 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 1 71 IPR045134 -
Trme1181276g00001 71 Gene3D - 1 71 IPR036987 -
Trme1181276g00001 71 SUPERFAMILY PUA domain-like 3 71 IPR015947 -
Trme1181276g00001 71 SMART G9a_1 1 71 IPR003105 -
Trme1181276g00001 71 Pfam SAD/SRA domain 3 67 IPR003105 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1181276g00001 1 71 C2H2 Transcription Factor Family AT5G39550 87.324 2.99e-42 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1181276g00001 K10638 - zof:122034723 149.058