Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme118117g00001 CACGGTTTGATTCGTAGGGATGCTTTGAAGGTATTGTGGAAGGAACCAAGGTTGATGACTTATGATTTGGAGGATATTGAGAAGAAGATTGAGTTTTTAGTTCATAGGATGAAATATGGTATTGATTGTTTGCATGAAGTTCCTGAATACTTGGGTGTGAATTTTGAAAAGCAGATTGTTCCTAGATACAATGTGATCGAGTATTTGAATGGAAAGGGTGCAATTGGGTTTGAAGTTAGATTGAAGGACCTTATCAAACCAACTAGGCTTAGATTTTATAACCTTTATGTCAAGCCTTACCCTGAATGTGAAAAAATATATGGCAGATTTTCAGGTAAGGTTGAAATTAAAAGAAACCATCCTGCTGGACTTTGGAAGCTGTTCAAACCACAAAAGTTTACACAAACCGATAAAGATGTGAAGAACATGAAGGCTTTCATGGGTTCACTGGTGTAG 456 0.3684 HGLIRRDALKVLWKEPRLMTYDLEDIEKKIEFLVHRMKYGIDCLHEVPEYLGVNFEKQIVPRYNVIEYLNGKGAIGFEVRLKDLIKPTRLRFYNLYVKPYPECEKIYGRFSGKVEIKRNHPAGLWKLFKPQKFTQTDKDVKNMKAFMGSLV 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme118117g00001 151 Pfam mTERF 2 88 IPR003690 GO:0003690|GO:0006355
Trme118117g00001 151 Gene3D Transcription termination factor 3, mitochondrial 1 111 IPR038538 -
Trme118117g00001 151 SMART mt_12 9 40 IPR003690 GO:0003690|GO:0006355
Trme118117g00001 151 SMART mt_12 41 72 IPR003690 GO:0003690|GO:0006355
Trme118117g00001 151 PANTHER CGI-12 PROTEIN-RELATED 2 100 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trme118117g00001 mTERF 1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme118117g00001 - - tpra:123895828 304.293