Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme118042g00001 GGTCAATGTTGCTGTGCTGGGTCGCGTACTTATGTGCACGAGCGAATATATGATGAGTTCTTGGAGAAAGCCAAGGCAGCTGCTTCGAAACGTGTAGTTGGTGATCCATTCAAAAAAGGTGTAGAGCAAGGTCCTCAGGAGGTCGGGGTTCGAACCCCGGCCATCCCACTTATCCACCTTAAGGGTGGAATTTCTAGCCACTAG 204 0.5049 GQCCCAGSRTYVHERIYDEFLEKAKAAASKRVVGDPFKKGVEQGPQEVGVRTPAIPLIHLKGGISSH 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme118042g00001 67 Pfam Aldehyde dehydrogenase family 1 46 IPR015590 GO:0016491
Trme118042g00001 67 SUPERFAMILY ALDH-like 1 46 IPR016161 GO:0016491
Trme118042g00001 67 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 46 - -
Trme118042g00001 67 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 1 51 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme118042g00001 Trme-Chr118042 58 550 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme118042g00001 1 67 Aldehyde Dehydrogenase Gene Family AT3G48000 61.194 4.94e-25 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme118042g00001 K00128 - twl:120015868 97.8265