Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme118019g00001 CTAAGTGAAGGATACTATGTAATGGACCCTAAAAAGGCTGTAGATTTGGTGGATGAGAACACAATTTGTGTTGCTGCCATCCTTGGTTCCACATTAAATGGAGAGTTTGAAGATGTTAAAACCTTAAATGATCTCCTAGTCGAAAAGAATAAAGAAACCGGATGGGACACTCCTATTCATGTCGATGCAGCTAGTGGTGGCTTCATTGCCCCATTTATTTATCCAGAGCTCGTGTGGGATTTTCGCTTACCGCTCGTGAAGAGCATCAATGTTAGTGGTCACAAATATGGTCTTGTCTATGCCGGAATCGGTTGGGCTGTTTGGAGAAGCAAGGAAGACTTGCCTGAGGAACTCATTTTTCACATCAACTATCTAGGAGCTGATCAACCTACCTTTACCCTCAATTTCTCCAAAGGTAACACATAA 426 0.4225 LSEGYYVMDPKKAVDLVDENTICVAAILGSTLNGEFEDVKTLNDLLVEKNKETGWDTPIHVDAASGGFIAPFIYPELVWDFRLPLVKSINVSGHKYGLVYAGIGWAVWRSKEDLPEELIFHINYLGADQPTFTLNFSKGNT 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme118019g00001 141 SUPERFAMILY PLP-dependent transferases 3 139 IPR015424 -
Trme118019g00001 141 PANTHER GLUTAMATE DECARBOXYLASE 1 140 IPR010107 GO:0004351|GO:0006536|GO:0030170
Trme118019g00001 141 Pfam Pyridoxal-dependent decarboxylase conserved domain 5 140 IPR002129 GO:0016830|GO:0019752|GO:0030170
Trme118019g00001 141 Gene3D - 1 141 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme118019g00001 Trme-Chr118019 2 584 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme118019g00001 1 141 Calmodulin-binding Proteins AT5G17330 92.199 5.56e-95 281