Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme118003g00001 CTTGTGTTATTTACCTTACTTTCTGTTATCCGGGAAGCTTGGAAGAGAAGATACGAGAAGTGTGATCGTAAAGAGGATATAGAAAGCCTATCAAGGACGGCTGTGGATGCGCCTAAGATGTTCGGTTACAAGGAACTGTCAAAAGCCACTTGTAAGTTCAGTAAAGAAAATATTGTGGGAAGAGGTGGATTTGGAAGTGTTTATAAAGGCTTCATGTTAGAAAATGGAAAAACCATAGCAGTAAAGAAAATTTCAGCAACTTCTAAGCAAGGTATGTTCTGGTAA 285 0.386 LVLFTLLSVIREAWKRRYEKCDRKEDIESLSRTAVDAPKMFGYKELSKATCKFSKENIVGRGGFGSVYKGFMLENGKTIAVKKISATSKQGMFW 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme118003g00001 94 SUPERFAMILY Protein kinase-like (PK-like) 37 88 IPR011009 -
Trme118003g00001 94 ProSitePatterns Protein kinases ATP-binding region signature. 59 83 IPR017441 GO:0005524
Trme118003g00001 94 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 7 91 - -
Trme118003g00001 94 Gene3D Phosphorylase Kinase; domain 1 22 93 - -
Trme118003g00001 94 ProSiteProfiles Protein kinase domain profile. 53 94 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme118003g00001 Trme-Chr118003 113 397 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme118003g00001 21 91 Trihelix Transcription Factor Family AT4G32710 49.296 4.78e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme118003g00001 - - ccaj:109810929 111.309