Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme117993g00001 TCAATGGGGATTTGCTGGAGTTATCCACCTAGAGATCCAACTCCAACTGGAACTGTTACACCTGCAGGGATATCTCATTCTCAGACCACAAGTGGAAGCTATGGTATTAGTACCACCACCACTGCTTCAACAACTACTACTTTCAATTCTGTTTCTACCACTTCTTTTGGAAGTGGAAGTGGAAGTGGAAGCAGCAGTAATATATCTTCCTCCATAAGTAGAAGCAACTTCTCCTCAGTTTCTGATTATTCAATTGGTGGCCAGATCTTACCTACTTCTAATTTGAGGATCTTTACTTTTGCTGAATTAAAGGCTGCTACCAAGAATTTCAAACCCGATACACTTCTTGGTGAGGGAGGTTTTGGTAAAGTTTACAAGGGATGGCTTGATTCCAAGAATAGTAGTGGAACTACCGTTGCCGTCAAAAAATTGAACTCCGAAGGCTACCAAGGACTCGAGGAGTGGCAG 468 0.4252 SMGICWSYPPRDPTPTGTVTPAGISHSQTTSGSYGISTTTTASTTTTFNSVSTTSFGSGSGSGSSSNISSSISRSNFSSVSDYSIGGQILPTSNLRIFTFAELKAATKNFKPDTLLGEGGFGKVYKGWLDSKNSSGTTVAVKKLNSEGYQGLEEWQ 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme117993g00001 156 MobiDBLite consensus disorder prediction 1 36 - -
Trme117993g00001 156 MobiDBLite consensus disorder prediction 18 36 - -
Trme117993g00001 156 PANTHER OS01G0588500 PROTEIN-RELATED 55 155 - -
Trme117993g00001 156 ProSitePatterns Protein kinases ATP-binding region signature. 116 143 IPR017441 GO:0005524
Trme117993g00001 156 Gene3D Phosphorylase Kinase; domain 1 85 156 - -
Trme117993g00001 156 SUPERFAMILY Protein kinase-like (PK-like) 88 148 IPR011009 -
Trme117993g00001 156 ProSiteProfiles Protein kinase domain profile. 110 156 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme117993g00001 156 MobiDBLite consensus disorder prediction 54 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme117993g00001 Trme-Chr117993 63 632 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme117993g00001 84 156 Receptor kinase-like Gene Family AT4G02010 49.315 2.10e-14 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trme117993g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme117993g00001 - - mtr:11430234 186.037