Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme117932g00001 ATGAAGAATATCCATAGGAGCAAACCAGTTCATAGCCATTCTTTGGAGAATTCCCGTGGCCAAGGGGCTGCTGCTGCTCCACTAACAGAATCCGAACGGCGTAATTTGAATGCGGAGATTCAAAGACTTCAATATGACAAAGAACAACTACTTCTGGAATTGGAGAGACAGGACGAGGAGTTGAAAGTGAAACAGATACAGTTACATTACGCGAAGGATNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTTGGTCAAGTGCTGCAGAAACCTAGGGATGAGTCAGGTCTCTGGCCACTGACAGAAAACTCGAAGAGAAAACGAAAGTTTCCGAGAAATATTCCCTTTAGTATTGACGCTAGCATTGAAGATCATATGGAAACTTCTTGTGTGTTACCTAGAGAAAATGCCGAGAGTGTATCTATTCTCTCGTTAAGCACGAGACGATTGGATCTGCTCGAGTCA 480 0.3937 MKNIHRSKPVHSHSLENSRGQGAAAAPLTESERRNLNAEIQRLQYDKEQLLLELERQDEELKVKQIQLHYAKDXXXXXXXXXXXXXXXXGQVLQKPRDESGLWPLTENSKRKRKFPRNIPFSIDASIEDHMETSCVLPRENAESVSILSLSTRRLDLLES 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme117932g00001 160 Coils Coil 33 67 - -
Trme117932g00001 160 MobiDBLite consensus disorder prediction 1 32 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme117932g00001 1 144 HSF AT4G18880 42.069 4.52e-21 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme117932g00001 K09419 - gmx:100820566 152.14