Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1177065g00001 ATGGCTCCTAAAGCTCGTTTAGCAGTTTATAAAGTTTGCTGGAACGGCGGTTGTTTTGATTCCGATATTCTCGCTGCGTTTGACGCCGCCGTGGCTGACGGTGTCGACGTGGTTTCTCTCAGTGTCGGTGGTGTTGTTGTGCCGTACCAT 150 0.5133 MAPKARLAVYKVCWNGGCFDSDILAAFDAAVADGVDVVSLSVGGVVVPYH 50
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1177065g00001 50 SUPERFAMILY Subtilisin-like 1 48 IPR036852 GO:0004252|GO:0006508
Trme1177065g00001 50 Gene3D Peptidase S8/S53 domain 1 45 IPR036852 GO:0004252|GO:0006508
Trme1177065g00001 50 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 46 IPR045051 -
Trme1177065g00001 50 Pfam Subtilase family 1 43 IPR000209 GO:0006508|GO:0008236
Trme1177065g00001 50 ProSiteProfiles Serine proteases, subtilase domain profile. 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1177065g00001 Trme-Chr1177065 1 150 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1177065g00001 1 50 Subtilisin-like Serine Gene Family AT3G14240 88.000 2.18e-25 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1177065g00001 - - gmx:100808511 77.4109