Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme117633g00001 ATGCTTTTGGGAAATGCAGTCAATATTTGCCACATTGGTCCTAATTCTTCTGAATCCGAGTATAGTTATGATATATTGGCGAGGTCTCAGACATGCAAACTGATATTACATTCTTCTGCAAAGAATGTTCAACGTGTTACTTTAGCAACTCTTTCATCGGAGTTCCTTGTCATTCCATCTGGTTCTTTTGAACCTCTCAAGCTAGAAATTTGCATAACCCCCTTGATGCAAATCTACGTAAAGACCCTGACTGGAACGATAATCCCCATGAGGGTTAAGAGTTCAGACACGATAGTCGATGTGAAGAAGAAGATTCTTGACAAGGGGGGCT 331 0.4079 MLLGNAVNICHIGPNSSESEYSYDILARSQTCKLILHSSAKNVQRVTLATLSSEFLVIPSGSFEPLKLEICITPLMQIYVKTLTGTIIPMRVKSSDTIVDVKKKILDKGG 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme117633g00001 110 Gene3D - 75 110 - -
Trme117633g00001 110 SUPERFAMILY Ubiquitin-like 64 109 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme117633g00001 Trme-Chr117633 1 572 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme117633g00001 76 110 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 65.714 1.66e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme117633g00001 - K04506 mtr:11432566 127.487