Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme117542g00001 ATGGGACATCGGCAACTCCCTGAAGATTTGAGATTTCGTGTTAGACGATTTGTTCAATATAAATGGCTTGCAACTCGTGGTGTTGATGAAGAAACCATTCTACGTTCATTGCCAACTGATCTTCGTCGTGATATCCAACGCCACTTATGCTTAGACCTTGTTAGACGA 168 0.4226 MGHRQLPEDLRFRVRRFVQYKWLATRGVDEETILRSLPTDLRRDIQRHLCLDLVRR 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme117542g00001 56 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 56 - -
Trme117542g00001 56 SUPERFAMILY cAMP-binding domain-like 1 55 IPR018490 -
Trme117542g00001 56 Gene3D Helix hairpin bin 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme117542g00001 Trme-Chr117542 167 334 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme117542g00001 1 56 Ion Channels AT2G24610 89.286 1.52e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme117542g00001 K05391 - gmx:100808425 108.612