Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme117396g00001 ATGAAACTACTCTGCTGGTCTGCTGATGTATCTGCAGCTCAAGATGATGTTTTCCTAGCCTTCATTCCAATGTTTCATATCTATGGACTGATGTTCTTTGGATTAGGGCTGTTGTGTGTTGGTGTTACGACAGTTTTGATGCAGAAATATGATTTCCAATCTATGCTTGTCGCTATCGAGAAGTACAAAGTTAATAACATACCAGCAGTGCCACCGGTGATCCATTCGTTGGTGAAACACGCAAGCAAAAATCGGTCWGACTTGTCTAGCCTAAGAMGAGTTGGCTCAGGTGCTGCACCTTTGAGTAAGGAAATGTCACAGGAGTTCAGAAAGATRTTTCCTTCGGTTGAACTAAGGTCGGGTTATGGACTAACAGAAAGTTGTGGTGGAGCAACATTTTTCGGGTCGGATAAAGATGCTAAAGCTCATCCAGAAGCATGTGGAAAGCTGATTCCAACTTTTTGTGCAAAAGTGATAGATATTGAAACAGGTAAGCCTTTGCCTCCTCACAAGGAAGGAGAGCTATGGCTGAAAAGTGCTACTATTATGAAAGAA 555 0.4198 MKLLCWSADVSAAQDDVFLAFIPMFHIYGLMFFGLGLLCVGVTTVLMQKYDFQSMLVAIEKYKVNNIPAVPPVIHSLVKHASKNRSDLSSLRRVGSGAAPLSKEMSQEFRKXFPSVELRSGYGLTESCGGATFFGSDKDAKAHPEACGKLIPTFCAKVIDIETGKPLPPHKEGELWLKSATIMKE 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme117396g00001 185 Pfam AMP-binding enzyme 12 184 IPR000873 -
Trme117396g00001 185 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 14 184 - -
Trme117396g00001 185 Gene3D Luciferase; Domain 3 133 185 - -
Trme117396g00001 185 Gene3D - 3 132 - -
Trme117396g00001 185 SUPERFAMILY Acetyl-CoA synthetase-like 12 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme117396g00001 Trme-Chr117396 1 555 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme117396g00001 15 184 Monolignol Biosynthesis Gene Families AT5G63380 41.520 1.71e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme117396g00001 K10526 - gmx:100775413 301.597