Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme117375g00001 GCCGTCATTGATAAGTTCGCAGAGCGAGGGTTGCGGTCTCTTGCAGTAGCCTATCAGGAAGTTCCCGATGGAAAGAAAGAAAGCCAGGGAAGACCTTGGCAATTTGTCGGACTCATGCCTTTGTTCGATCCACCTAGACATGATAGTGCCGAGACAATAAGAAGAGCGTTAGACCTTGGAGTAAATGTTAAAATGATAACAG 202 0.4653 AVIDKFAERGLRSLAVAYQEVPDGKKESQGRPWQFVGLMPLFDPPRHDSAETIRRALDLGVNVKMIT 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme117375g00001 67 PANTHER CALCIUM-TRANSPORTING ATPASE 2 67 - -
Trme117375g00001 67 Gene3D - 43 67 IPR023214 -
Trme117375g00001 67 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 2 48 IPR023299 GO:0000166
Trme117375g00001 67 Gene3D - 2 42 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme117375g00001 Trme-Chr117375 1 285 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme117375g00001 1 67 Primary Pumps ATPases AT5G62670 91.045 9.84e-38 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme117375g00001 K01535 - qsa:O6P43_009050 134.035